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Review paper

Molecular-genetics analysis of 15 STR loci in sibship testing in isolated rural Bosnian population – the use of the grey zone

By
Jasmin Mušanović Orcid logo ,
Jasmin Mušanović

Department of Medical Biology and Human Genetics, University of Sarajevo, Sarajevo, Bosnia and Herzegovina

Azra Metović ,
Azra Metović

Department of Medical Biology and Human Genetics<, University of Sarajevo, Sarajevo, Bosnia and Herzegovina

Esad Pepić ,
Esad Pepić

Department of Pathophysiology, University of Sarajevo, Sarajevo, Bosnia and Herzegovina

Almira Lujinović ,
Almira Lujinović

Department of Anatomy, University of Sarajevo, Sarajevo, Bosnia and Herzegovina

Adnan Fojnica ,
Adnan Fojnica

Institute of Biochemistry, Graz University of Technology, Graz, Austria

Faruk Husremović ,
Faruk Husremović
Contact Faruk Husremović

Department of Urology, Cantonal Hospital Zenica, Zenica, Bosnia and Herzegovina

Damir Šečić ,
Damir Šečić

Department of Pathophysiology, University of Sarajevo, Sarajevo, Bosnia and Herzegovina

Damir Marjanović ,
Damir Marjanović

International Burch University, Sarajevo, Bosnia and Herzegovina

Institute for Anthropological Researches, Zagreb, Croatia

Jasmin Šutković
Jasmin Šutković

Research and Development Centre, International University of Sarajevo, Sarajevo, Bosnia and Herzegovina

Abstract

Aim
Examination of the effectiveness of STR loci in proving sibship of the Bosnian-Herzegovinian village of Orahovica and
the formation of a “grey zone“.
Methods
The probability of sibship was determined by calculating the likelihood ratio (LR) parameter for each of the 15 observed
STR loci and for each of the pairs of relatives and non-relatives. Cumulative sibship index (CSI) was calculated for each of the pairs by multiplying the LR values of all 15 loci and obtained values are used as CSI limit for separating relatives from non-relatives. By creating a grey zone for local populations, an attempt was made to obtain a line of demarcation between siblings and non-siblings.
Results
An analysis of the origin of the respondents' relatives was performed, up to the level of sibship in the third generation. The
results of the CSI for pairs of relatives from the village of Orahovica showed that the highest CSI value, and therefore the sibship probability was recorded among relatives from the village of Orahovica (CSI=534211727.203;SP=99.999999812%). On the contrary, incredibly low CSI value was recorded among non-relatives,
ranging from CSI=0.0000001 to 0.5261434 (SP=0.000009999% to 34.475357951%).
Conclusion
For the threshold value CSI=1 and for CSI=3, this method determined sibship in 100% of pairs of relatives and the
absence of biological sibship in 100% of pairs of non-relatives in the village of Orahovica. The STR system is proved to be a successful method in determining sibship or absence of sibship in small local populations.

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